Resolving bundle-specific intra-axonal T2 values within a voxel using diffusion-relaxation tract-based estimation

Journal article


Barakovic, Muhamed, Tax, Chantal M. W., Rudrapatna, Umesh, Chamberland, Maxime, Rafael-Patino, Jonathan, Granziera, Cristina, Thiran, Jean-Philippe, Daducci, Alessandro, Canales-Rodríguez, Erick J. and Jones, Derek K.. (2021). Resolving bundle-specific intra-axonal T2 values within a voxel using diffusion-relaxation tract-based estimation. NeuroImage. 227, p. 117617. https://doi.org/10.1016/j.neuroimage.2020.117617
AuthorsBarakovic, Muhamed, Tax, Chantal M. W., Rudrapatna, Umesh, Chamberland, Maxime, Rafael-Patino, Jonathan, Granziera, Cristina, Thiran, Jean-Philippe, Daducci, Alessandro, Canales-Rodríguez, Erick J. and Jones, Derek K.
Abstract

At the typical spatial resolution of MRI in the human brain, approximately 60–90% of voxels contain multiple fiber populations. Quantifying microstructural properties of distinct fiber populations within a voxel is therefore challenging but necessary. While progress has been made for diffusion and T1-relaxation properties, how to resolve intra-voxel T2 heterogeneity remains an open question. Here a novel framework, named COMMIT-T2, is proposed that uses tractography-based spatial regularization with diffusion-relaxometry data to estimate multiple intra-axonal T2 values within a voxel. Unlike previously-proposed voxel-based T2 estimation methods, which (when applied in white matter) implicitly assume just one fiber bundle in the voxel or the same T2 for all bundles in the voxel, COMMIT-T2 can recover specific T2 values for each unique fiber population passing through the voxel. In this approach, the number of recovered unique T2 values is not determined by a number of model parameters set a priori, but rather by the number of tractography-reconstructed streamlines passing through the voxel. Proof-of-concept is provided in silico and in vivo, including a demonstration that distinct tract-specific T2 profiles can be recovered even in the three-way crossing of the corpus callosum, arcuate fasciculus, and corticospinal tract. We demonstrate the favourable performance of COMMIT-T2 compared to that of voxelwise approaches for mapping intra-axonal T2 exploiting diffusion, including a direction-averaged method and AMICO-T2, a new extension to the previously-proposed Accelerated Microstructure Imaging via Convex Optimization (AMICO) framework.

Keywordshuman brain; diffusion MRI; T2 relaxometry; tractography; white matter; COMMIT
Year2021
JournalNeuroImage
Journal citation227, p. 117617
PublisherElsevier B.V.
ISSN1053-8119
Digital Object Identifier (DOI)https://doi.org/10.1016/j.neuroimage.2020.117617
Scopus EID2-s2.0-85098461672
Open accessPublished as ‘gold’ (paid) open access
Research or scholarlyResearch
Page range1-12
Publisher's version
License
File Access Level
Open
Output statusPublished
Publication dates
Online07 Dec 2020
Publication process dates
Accepted29 Nov 2020
Deposited30 Jun 2021
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License: CC BY-NC-ND 4.0
File access level: Open

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