Molecular phylogenetics of the Pectinidae (Mollusca : Bivalvia) and effect of increased taxon sampling and outgroup selection on tree topology

Journal article


Puslednik, Louise and Serb, Jeanne. (2008). Molecular phylogenetics of the Pectinidae (Mollusca : Bivalvia) and effect of increased taxon sampling and outgroup selection on tree topology. Molecular Phylogenetics and Evolution. 48(3), pp. 1178-1188. https://doi.org/10.1016/j.ympev.2008.05.006
AuthorsPuslednik, Louise and Serb, Jeanne
Abstract

Evolutionary relationships of the Pectinidae were examined using two mitochondrial genes (12S rRNA, 16S rRNA) and one nuclear gene (Histone H3) for 46 species. Outgroup taxa from Propeamussidae, Spondylidae and Limidae were also sequenced to examine the impact of outgroup choice on pectinid topologies. Our phylogenetic analyses resolved the Pectinidae as monophyletic, but many of the subfamilies and tribes within the family do not form monophyletic clades. The paraphyletic Aequipectinini group is the most basal member of the Pectinidae, with the Chlamydinae and Palliolinae representing the most recently derived pectinid groups. These results are in contrast with the current morphological hypothesis of Pectinidae evolution, which suggests the Chlamydinae and Pallioline are basal groups within the Pectinidae. Ingroup topology was found to be sensitive to outgroup choice and increasing taxon sampling within the Pectinidae resulted in more robust phylogenies.

KeywordsPectinidae; Systematics; Molecular phylogeny; 16S rRNA; 12S rRNA; Histone H3; Scallops
Year01 Jan 2008
JournalMolecular Phylogenetics and Evolution
Journal citation48 (3), pp. 1178-1188
PublisherAcademic Press (Elsevier)
ISSN1055-7903
Digital Object Identifier (DOI)https://doi.org/10.1016/j.ympev.2008.05.006
Scopus EID1-s2.0-S1055790308002236
Web address (URL)https://www.sciencedirect.com/science/article/pii/S1055790308002236
Open accessPublished as non-open access
Research or scholarlyResearch
Page range1178-1188
Publisher's version
License
All rights reserved
File Access Level
Controlled
Output statusPublished
Publication dates
Online14 May 2008
Publication process dates
Accepted07 May 2008
Deposited23 Apr 2024
Additional information

© 2008 Elsevier Inc. All rights reserved.

Place of publicationUnited States
Permalink -

https://acuresearchbank.acu.edu.au/item/906w8/molecular-phylogenetics-of-the-pectinidae-mollusca-bivalvia-and-effect-of-increased-taxon-sampling-and-outgroup-selection-on-tree-topology

Restricted files

Publisher's version

  • 14
    total views
  • 0
    total downloads
  • 0
    views this month
  • 0
    downloads this month
These values are for the period from 19th October 2020, when this repository was created.

Export as

Related outputs

Improving radiologist's ability in identifying particular abnormal lesions on mammograms through training test set with immediate feedback
Trieu, Phuong Dung (Yun), Lewis, Sarah J., Li, Tong, Ho, Karen, Wong, Dennis J., Tran, Oanh T. M., Puslednik, Louise, Black, Deborah and Brennan, Patrick C.. (2021). Improving radiologist's ability in identifying particular abnormal lesions on mammograms through training test set with immediate feedback. Scientific Reports. 11(1), p. Article 9899. https://doi.org/10.1038/s41598-021-89214-3
Interpretative characteristics and case features associated with the performances of radiologists in reading mammograms : A study from a non-screening population in Asia
Trieu, Phuong Dung (Yun), Puslednik, Louise, Colley, Brooke, Brennan, Anna, Rodriguez, Veruska Cediel, Cook, Nicholas, Dean, Kaitlin, Dryburgh, Sarah, Lowe, Hayden, Mahon, Charlotte, McGowan, Saxon, O'Brien, Joshua, Moog, William, Whale, Jorja, Wong, Dennis, Li, Tong and Brennan, Patrick c.. (2021). Interpretative characteristics and case features associated with the performances of radiologists in reading mammograms : A study from a non-screening population in Asia. Asia-Pacific Journal of Clinical Oncology. 17(1), pp. 139-148. https://doi.org/10.1111/ajco.13429
Mammographic interpretation in Vietnam : Tailored educational strategies are needed to increase clinicians’ expertise
Caspar, Felix, Copps, Emily, Diplas, Adrienne, Hackney, Logan, Jackson, Kyle, Kearins, Imogen, Lynch, Marcus, McPherson, Dominique, Pisconeri, Bellah, Purkiss, Zara, Thomas, Lucy, Colley, Brooke, Tapia, Kriscia, Ho, Karen, Trieu, Phuong Dung (Yun), Brennan, Patrick and Puslednik, Louise. (2021). Mammographic interpretation in Vietnam : Tailored educational strategies are needed to increase clinicians’ expertise. Asia-Pacific Journal of Clinical Oncology. 17(5), pp. e212-e216. https://doi.org/10.1111/ajco.13436
The architecture of insects - Intersection of art and science
Puslednik, Louise and Jackson, Denise. (2021). The architecture of insects - Intersection of art and science. Science Education News. 70(4), pp. 31-32.
Hands-on science mentoring beneficial for rural students
Puslednik, Louise. (2020). Hands-on science mentoring beneficial for rural students Australian Council for Educational Research.
An Australian-based authentic science research programme transforms the 21st century learning of rural high school students
Puslednik, Louise and Brennan, Patrick C.. (2020). An Australian-based authentic science research programme transforms the 21st century learning of rural high school students. Australian Journal of Education. 64(2), pp. 98-112. https://doi.org/10.1177/0004944120919890
Breast cancer diagnostic efficacy in a developing South-East Asian country
Jackson, Rhianna L., Double, Callan R., Munro, Hayden J., Lynch, Jessica, Tapia, Kriscia A., Trieu, Phuong Dung, Alakhras, Maram, Ganesan, Aarthi, Do, Thuan Doan, Soh, Baolin Pauline, Brennan, Patrick C. and Puslednik, Louise. (2019). Breast cancer diagnostic efficacy in a developing South-East Asian country. Asian Pacific Journal of Cancer Prevention. 20(3), pp. 727-731. https://doi.org/10.31557/APJCP.2019.20.3.727
Science, engineering, and maths expo in Mudgee
Puslednik, Louise. (2017). Science, engineering, and maths expo in Mudgee. Science Education News. 66(2), pp. 46-47.
Shell shape convergence masks biological diversity in gliding scallops : Description of Ylistrum n. gen. (Pectinidae) from the Indo-Pacific Ocean
Mynhardt, Glené, Alejandrino, Alvin, Puslednik, Louise, Corrales, Joezen and Serb, Jeanne M.. (2014). Shell shape convergence masks biological diversity in gliding scallops : Description of Ylistrum n. gen. (Pectinidae) from the Indo-Pacific Ocean. Journal of Molluscan Studies. 80(4), pp. 400-411. https://doi.org/10.1093/mollus/eyu038